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Hierarchical Petri Nets for Modeling Metabolic Phenotype in Prokaryotes

IR@CECRI: CSIR-Central Electrochemical Research Institute, Karaikudi

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Title Hierarchical Petri Nets for Modeling Metabolic Phenotype in Prokaryotes
 
Creator Balasubramanian, N.
Yeh, M.L.
Chang, C.T.
Chen, S.J.
 
Subject Electroorganic
 
Description A systematic strategy is presented in this paper to build Petri-net models for the biological reaction networks and their gene regulation mechanisms in prokaryotes. Component models are first developed to represent the cellular functional units, i.e., operons, regulons, modulons, and individual reactions. A step-by-step procedure is then proposed to assemble these components to form hierarchical system models. The usefulness of the proposed approach is demonstrated with a realistic example. The model validity is shown by comparing simulation predictions with experimental data in the literature.
 
Publisher American Chemical Society
 
Date 2005
 
Type Article
PeerReviewed
 
Format application/pdf
 
Identifier http://cecri.csircentral.net/72/1/035-2005.pdf
Balasubramanian, N. and Yeh, M.L. and Chang, C.T. and Chen, S.J. (2005) Hierarchical Petri Nets for Modeling Metabolic Phenotype in Prokaryotes. Industrial and Engineering Chemical Research, 44 (70). pp. 2218-2240.
 
Relation http://cecri.csircentral.net/72/