Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.
IR@IMTECH: CSIR-Institute of Microbial Technology, Chandigarh
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| Title |
Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.
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| Creator |
Palaniappan, Krishna
Meier-Kolthoff, Jan P Teshima, Hazuki Nolan, Matt Lapidus, Alla Tice, Hope Del Rio, Tijana Glavina Cheng, Jan-Fang Han, Cliff Tapia, Roxanne Goodwin, Lynne A Pitluck, Sam Liolios, Konstantinos Mavromatis, Konstantinos Pagani, Ioanna Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Chen, Amy Rohde, Manfred Mayilraj, Shanmugam Spring, Stefan Detter, John C Göker, Markus Bristow, James Eisen, Jonathan A Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Woyke, Tanja |
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| Subject |
QR Microbiology
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| Description |
Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae, a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of anaerobic environments including soil, oil wells, wastewater treatment plants and animal gastrointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related species, T. acidaminovorans. In addition to Su883(T), the type strain of T. acidaminovorans, stain Z-9701(T) is the second type strain in the genus Thermanaerovibrio to have its genome sequence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the G enomic E ncyclopedia of Bacteria and Archaea project.
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| Publisher |
BMC part of Springer Nature
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| Date |
2013-10-16
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Article
PeerReviewed |
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| Relation |
https://environmentalmicrobiome.biomedcentral.com/articles/10.4056/sigs.4237901
http://crdd.osdd.net/open/2448/ |
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| Identifier |
Palaniappan, Krishna and Meier-Kolthoff, Jan P and Teshima, Hazuki and Nolan, Matt and Lapidus, Alla and Tice, Hope and Del Rio, Tijana Glavina and Cheng, Jan-Fang and Han, Cliff and Tapia, Roxanne and Goodwin, Lynne A and Pitluck, Sam and Liolios, Konstantinos and Mavromatis, Konstantinos and Pagani, Ioanna and Ivanova, Natalia and Mikhailova, Natalia and Pati, Amrita and Chen, Amy and Rohde, Manfred and Mayilraj, Shanmugam and Spring, Stefan and Detter, John C and Göker, Markus and Bristow, James and Eisen, Jonathan A and Markowitz, Victor and Hugenholtz, Philip and Kyrpides, Nikos C and Klenk, Hans-Peter and Woyke, Tanja (2013) Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio. Standards in genomic sciences, 9 (1). pp. 57-70. ISSN 1944-3277
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